In 2006 Flowers played 34 games played in his first professional season for the Rookie League Danville Braves. He hit .279 with 36 hits, 5 home runs and 16 RBIs playing 22 games at first and 8 as a catcher.
In 2007 he was the everyday first baseman/DH for the A-ball Rome Braves. He played in 106 games with a batting average of .298 with 116 hits (led the team), 12 homers (third most) 70 RBIs (tops on the club) and a .488 slugging percentage (third highest on the team). He started off slow in May (.238) and June (.257) before heating up in July (.352), August (.317) and September (.444)
In 2008 Flowers played for the Myrtle Beach Pelicans of high-A. He played 122 games, all at catcher. He had a .288 batting average, .427 on base percentage, and .494 slugging percentage.
- Career statistics and player information from The Baseball Cube
<ref>tags exist, but no
<references/>tag was found